Have questions? We're here.
Cultivated fields surrounded by the Andes Mountains

Ecuador Small Ship Cruises & Tours

Travel made your way
Talk with an expert
Build your ideal Ecuador trip. Call 1.406.541.2677
Start Planning My Trip
Filter (251 Results)
  • Start Date
    OR, More specific start
  • Length
    to
  • Price
    to
  • Activity Levels
  • Experiences
  • Activities
  • Ships
  • Destinations
    • Ecuador
Bonita Galapagos Yatch
from $41,040
EXPLORE

Private Charter - Southern Islands Aboard Bonita

5 Day Itinerary aboard Bonita
  • Hike over islands covered in cacti
  • Kayak and stand up paddle board
  • Admire distinctive biodiversity
Starts / Ends
Highlands / Bachas Beach
Activity Level
Variable
This 5-day private cruise of Galapagos' Southern Islands on the Bonita yacht explores the islands of Espanola, Santa Cruz, San Cristobal and more. Kayak and paddle board along island shores, swim and snorkel among sea lions, and enjoy breathtaking views on hikes.
Cruise Details
0
Punta Suarez on Espanola Island - lounging iguanas
from $62,490
EXPLORE

Private Charter - Galapagos Southern & Eastern Islands

Baltra to San Cristobal - 4 Day Itinerary aboard M/C Monique
  • Spot Santa Cruz's giant tortoises
  • Visit Floreana Post Office Bay
  • Walk Punta Suarez seabird cliffs
  • Visit Post Office Bay
Starts / Ends
Baltra / San Cristobal
Activities
Wildlife Viewing, Snorkeling, Hiking, Kayaking, Stand Up Paddle Boarding
Activity Level
Variable
Embark on a 4-day private charter Galapagos cruise across Santa Cruz, Floreana, Española, and San Cristobal. Enjoy exclusive access to iconic sites, from Post Office Bay to Kicker Rock. Snorkel with sea lions, observe giant tortoises, and hike diverse habitats with full privacy and personalized experiences in the islands.
Cruise Details
0
The Nemo II
from $62,000
EXPLORE

Private Charter - North & West Islands

8 Day Itinerary aboard Nemo II
  • Ride a zodiac in Tagus Cove
  • Explore the cliffs of Isabela
  • Climb Prince Phillip's Steps
  • Take a trail to a flamingo lagoon
Starts / Ends
Baltra / Baltra
Activity Level
Variable
This 8-day North & West Islands Galapagos private cruise on the Nemo II explores the wildlife-rich shores of Santa Cruz, Isabela, Santiago, Rabida, and more. Experience a more intimate and profound nature and cruise while enjoying amazing and unexpected encounters with the unique Galapagos wildlife.
Cruise Details
0
Devil's Crown Galapagos
from $62,000
EXPLORE

Private Charter - Southeast Islands

8 Day Itinerary aboard Nemo II
  • Dive & snorkel at Kicker Rock
  • Learn about Post Office Bay
  • Inspect the ecosystem
  • Hike on Chinese Hat
Starts / Ends
Baltra / Baltra
Activities
Small Ship Sailing
Activity Level
Variable
Embark on an 8-day private journey across the Galapagos' Southeast Islands onboard the catamaran Nemo II. Explore the wildlife and vegetation-rich shores of Santa Cruz, San Cristobal, Espanola, Floreana, Santa Fe, South Plaza, Bartolome, and Chinese Hat. Enjoy opportunities to hike, snorkel, kayak, or cruise on a panga boat.
Cruise Details
0
Corals sailing together
from $56,256
EXPLORE

Private Charter - Galapagos Southeast Islands Aboard Corals

5 Day Itinerary aboard Corals
  • Visit Cerro Brujo´s lava formations
  • Hike across Española Island
  • Swim and snorkel at Devil´s Crown
Starts / Ends
San Cristobal Airport / Baltra
Activity Level
Variable
Embark on an affordable 5-day Galapagos private cruise aboard the Corals yacht exploring the southeastern and central islands' wildlife and stunning landscape, including San Cristobal, Española, Floreana, and Santa Cruz. Encounter giant tortoises, snorkel in the crystalline waters and view colorful fish, sharks, rays, and sea turtles.
Cruise Details
0
Corals during the sunset
from $56,256
EXPLORE

Private Charter - Western Galapagos Islands Cruise Aboard Corals

5 Day Itinerary aboard Corals
  • Snorkel at the Bolivar Channel
  • Meet Fernandina's endemic species
  • Land on Urbina's black beach
  • Explore Santiago's shores
Starts / Ends
Baltra / Baltra
Activity Level
Variable
This 5-day all-inclusive private Galapagos cruise aboard the Corals yacht explores the central and western islands of Santa Cruz, Fernandina, Isabela, and Santiago. Hike among dramatic volcanic landscapes filled with wildlife, and snorkel among marine iguanas, sea turtles, and playful sea lions.
Cruise Details
0
Aida Maria
from $53,978
EXPLORE

Private Charter - Eastern Islands Aboard Aida Maria

8 Day Itinerary aboard Aida Maria
  • Explore the beaches of Las Bachas
  • Visit Black Turtle Cove
  • Snorkel by Cerro Dragon
  • Navigate around Kicker Rock
Starts / Ends
Baltra / San Cristobal Airport
Activity Level
Variable
Travel aboard the Aida Maria to the stunning Galapagos Islands. Witness a sea turtle nesting area, swim with penguins, see a variety of birds and wildlife, and explore lava flows on this 8-day private charter cruise adventure for up to 16-passengers.
Cruise Details
0
The Aida Maria
from $53,978
EXPLORE

Private Charter - Western Islands Aboard Aida Maria

8 Day Itinerary aboard Aida Maria
  • Witness giant tortoises
  • Follow a path to a forest of cacti
  • Hike to the Sierra Negra Volcano
  • Explore coastal lagoons
Starts / Ends
San Cristobal Airport / Baltra
Activity Level
Variable
This private cruise to the Western Islands of the Galapagos allows you to witness the archipelago's exciting and unique plants, animals, and landscapes. Swim, hike, and explore on this 8-day tour on the Aida Maria.
Cruise Details
0
Giant tortoises in the Galapagos
from $38,450
EXPLORE

Private Charter - Southern Islands Aboard Galapagos Angel

4 Day Itinerary aboard Galapagos Angel
  • Explore the highlands of Santa Cruz
  • Spot blue-footed boobies
  • Stroll along Gardner Bay
  • Visit Black Turtle Cove
Starts / Ends
Baltra / Baltra
Activity Level
Variable
Explore Santa Cruz's highlands, Suarez Point, Gardner Bay's white-sand beaches, and Santa Fe Island's scenic trails during this 4-day private Southern Galapagos cruise aboard the Galapagos Angel. Conclude your journey with a visit to the Black Turtle Cove, encountering wildlife and relaxation along the way.
Cruise Details
0
Aida Maria
from $34,986
EXPLORE

Private Charter - Northern Islands Aboard Aida Maria

5 Day Itinerary aboard Aida Maria
  • Take a tour around Darwin Bay
  • Snorkel off the beach of Las Bachas
  • View Daphne Island, a volcanic cone
Starts / Ends
Baltra / Baltra
Activity Level
Variable
Explore the landscapes and wildlife of the northern Galapagos Islands during this 5-day private charter cruise aboard the Aida Maria.
Cruise Details
0
Aida Maria
from $28,988
EXPLORE

Private Charter - Southern Islands Aboard Aida Maria

4 Day Itinerary aboard Aida Maria
  • Snorkel with tropical fish
  • Visit the Charles Darwin Station
  • Take a dingy ride to see sea lions
Starts / Ends
Baltra / San Cristobal Airport
Activity Level
Variable
Experience the native flora and fauna of the Southern Galapagos Islands during this 4-day private cruise. Explore the beautiful beaches, a local market, and a sea turtle nesting site on your cruise aboard the Aida Maria.
Cruise Details
0
Beach on Isabela island
from $17,860
EXPLORE

Galapagos Evolution Circumnavigation

15 Day Itinerary aboard Evolution
  • Hike up Prince Phillip's Steps
  • Journey to Chinese Hat
  • Visit Black Turtle Cove
  • View new and old tortoises
Starts / Ends
Baltra / Baltra
Activity Level
Variable
Enjoy the Islands Circumnavigation tour aboard the Evolution. This 15-day voyage offers island trails, lagoons, white sand beaches and volcanic vistas. Snorkel and swim in crystalline waters and view abundant wildlife on this Galapagos adventure.
Cruise Details
0
Adult green sea turtle (Chelonia mydas agassizii) underwater off the west side of Isabela Island in the Galapagos Islands
from $8,819
Save 20%
EXPLORE

Galapagos Escape

8 Day Itinerary aboard National Geographic Islander II
  • Snorkel and kayak among wildlife
  • Walk along colonies of seabirds
  • Visit Pinnacle Rock
  • See red-footed boobies and lizards
Starts / Ends
Guayaquil / Guayaquil
Activities
Whale Watching
Activity Level
Variable
Discover the vibrant islands of the Galapagos on this 8-day cruise through fascinating activities such as walking and trekking, kayaking, paddle boarding, and snorkeling. The National Geographic Islander II, an all-suite vessel, elevates the Galapagos experience with new levels of style and comfort. 
Cruise Details
0
Lounging iguana on South Plaza Island, Galapagos
from $14,495
EXPLORE

Western & Eastern Islands

Baltra - San Cristobal - 9 Day Itinerary aboard Hermes Ultra Luxury Cruise
  • Explore Tagus Cove
  • Marvel at Urbina Bay
  • Visit Santa Cruz highlands
  • Encounter diverse wildlife
Starts / Ends
Baltra / San Cristobal Airport
Activity Level
Variable
Explore the Western & Eastern Galapagos Islands on this 9-day cruise aboard the Hermes Ultra Luxury Cruise. Discover Bachas Beach, Tagus Cove, Urbina Bay, Espinoza Point, Santiago Island, and more. Witness unique wildlife, hike, snorkel, and savor the stunning natural beauty of the Galapagos Islands.
Cruise Details
0
Galapagos penguin on a rock
from $7,961
EXPLORE

Galapagos Circumnavigation

15 Day Itinerary aboard Galapagos Legend
  • Visit Black Turtle Cove
  • Spot Genovesa red-footed boobies
  • Explore Rabida's red sand beaches
  • Observe the Galapagos tortoise
Starts / Ends
Baltra / Baltra
Activity Level
Variable
This 15-day Circumnavigation of the Galapagos Islands on the highly-rated Galapagos Legend ship provides a comprehensive, unforgettable tour of the Galapagos. Spend your days exploring the archipelago, encountering sea lions, Galapagos penguins, frigate birds, flightless cormorants, giant tortoises, and many more unique native species!
Cruise Details
0
Sea lion in galapagos
from $11,695
EXPLORE

Southern & Northern Islands

San Cristobal - Baltra - 7 Day Itinerary aboard Hermes Ultra Luxury Cruise
  • Enjoy exploring Española Island
  • Discover Floreana's beaches
  • Interact with the playful sea lion
  • Explore Genovesa Island
Starts / Ends
San Cristobal Airport / Baltra
Activity Level
Variable
Join the 7-Day Hermes Ultra Luxury Cruise in the Eastern & Central Galapagos, beginning on San Cristóbal Island. Explore Tijeretas, Gardner Bay, Punta Suárez, and Floreana. Snorkel at Champion Islet, then visit Genovesa Island. Conclude at Black Turtle Cove, disembarking in Baltra, marking the end of your unforgettable journey.
Cruise Details
0
Sea lions being lazy on the beach
from $5,995
up to 25%
EXPLORE

Enchanted Escape

Baltra - San Cristobal - 5 Day Itinerary aboard Tribute
  • Explore Santa Cruz El Chato Reserve
  • Witness playful Galapagos sea lions
  • See yellow-crowned night herons
  • Visit Post Office Bay
Starts / Ends
Baltra / San Cristobal Airport
Activity Level
Variable
Experience the exciting 5-day South & East Enchanted Escape Galapagos Islands cruise aboard Tribute. Encounter giant tortoises in Santa Cruz, sea lions at Mosquera, and 'Galapagos dragons' at South Plaza. Visit Post Office Bay, Baroness Lookout, and El Soplador. Conclude with the Interpretation Center visit on San Cristobal island before departure.
Cruise Details
0
Land Iguana in the Galapagos
from $5,995
up to 25%
EXPLORE

Wildlife Discovery

San Cristobal - Baltra - 5 Day Itinerary aboard Tribute
  • Observe blue-footed boobies
  • Explore Black Turtle Cove
  • Get surprised by curious sea lions
  • Visit Darwin Research Station
Starts / Ends
San Cristobal Airport / Baltra
Activity Level
Variable
Explore Central & North Galapagos in a 5-day Wildlife Discovery cruise aboard Tribute. Encounter sea lions, blue-footed boobies, frigate birds, Galapagos hawks, diverse marine life, and giant tortoises at Darwin Research Station. Enjoy close encounters snorkeling with penguins, and turtles, and witness nature's wonders in diverse island habitats.
Cruise Details
0
127-144 of 251 Results

Ecuador Travel Guide

Favorite Ecuador Ecuador All Trips

Top Ecuador Travel Destinations

Ecuador Trips by Departure Date

Top Experiences in Ecuador

Ecuador Trips by Duration

Ecuador Trips by Activity

More Reasons

Why Travel With Adventure Life

All News

Recognized By