Indonesia Tours & Cruises in 2026

from $15,300

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Raja Ampat & Spice Islands Expedition

Sorong to Ambon - 11 Day Itinerary aboard Aqua Blu

• Explore Kali Biru river
• Dive Mayhem Reef thrills
• Explore Banda Neira’s Dutch forts
• Spot dugongs near Nusa Laut

Starts / Ends

Sorong / Ambon Island

Activities

Kayaking, Festival Visits, Scuba Diving, Fishing, Cooking Classes

Activity Level

Variable

Embark on an 11-day luxury cruise through Raja Ampat and the Spice Islands aboard Aqua Blu, visiting Sorong, Mioskon, Yangeffo, Aljui Bay, and Yeben Island. Snorkel with reef sharks and dugongs, explore ancient caves and Dutch forts, and experience local culture in Arborek Village and Nusa Laut.

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from $10,400

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The Wonders of North Maluku: A Snorkelling, Wildlife & Cultural Adventure

Ternate - Ternate - 13 Day Itinerary aboard Katharina

• Discover Makian Island landscapes
• Explore Halmahera's local culture
• Encounter wildlife in Bacan Island
• Discover Ternate’s landmarks

Starts / Ends

Ternate Island / Ternate Island

Activity Level

Variable

Embark on a 13-day cruise aboard the Katharina. Explore North Maluku's islands, forests, and reefs, featuring cultural experiences, wildlife encounters, and snorkeling on pristine beaches.

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from $14,160

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Islands, cities and volcanoes of Indonesia

Benoa, Bali - Singapore - 15 Day Itinerary aboard Le Jacques Cartier

• Explore Mount Bromo
• Visit Borobudur Temple
• Discover Ujung Kulon
• Explore Malacca history

Starts / Ends

Benoa / Singapore

Activities

Small Ship Sailing, Spa Relaxation

Activity Level

Variable

Sail from Bali to Singapore on a 15-day cruise aboard Le Jacques-Cartier. Witness volcanic peaks, ancient temples, and wildlife sanctuaries. Visit Java’s Mount Bromo, Sumatra’s Mentawai Islands, and historic Malacca. Enjoy rich cultural encounters, scenic island vistas, and onboard comforts throughout this Southeast Asian journey.

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from $8,100

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The Jewels of Raja Ampat

10 Day Itinerary aboard Ombak Putih

• Discover the Misool archipelago
• Explore Tomolol’s dome-topped cave
• Spot the red bird of paradise
• Admire Raja Ampat’s beauty

Starts / Ends

Sorong / Sorong

Activity Level

Variable

Join the Ombak Putih on this exceptional 10-day cruise of Indonesia and explore Raja Ampat. Kayaking and snorkeling are highlights of this itinerary, along with cultural visits to local villages that give you insights into the local way of life, customs, and traditions of life in this region of the world.

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from $8,100

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Papua's Whale Sharks and Birds of Paradise

Sorong - Kaimana - 10 Day Itinerary aboard Ombak Putih

• Swim under Kitikiti waterfall
• Explore the maze of karst islands
• View birds of paradise in nature
• Enjoy the isolated Ceram Sea

Starts / Ends

Sorong / Triton Bay

Activity Level

Variable

Take a cruise from Sorong to Kaimana in discovering Papua's whale sharks and different bird-of-paradise species aboard the Ombak Putih ship on this 10-day voyage. Visit Dampier Strait, Misool Archipelago, Mainland of Papua, Triton Bay, and Namatote Passage.

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from $3,698

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Java Highlights

12 Day Itinerary

• Discover the history of Borobudur
• Explore the harbor of Sunda Kelapa
• See Bogor's Botanical Gardens
• Visit Pramban, ancient Hindu temple

Starts / Ends

Yogyakarta / Surabaya

Activity Level

Relaxed

Explore the highlights of Java on this 12-day tour in Asia. Here is a glimpse of what awaits you. Tour Sunda Kelapa harbor and Taman Fatahilla's museums. Discover Bogor's diverse Botanical Gardens before visiting Gunung Mas Tea Plantation. See the world's largest Buddhist temple, Borobudur, and learn into Java's heritage at the Sultan’s Palace.

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from $8,525

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Secrets of the Coral Triangle

Jayapura to Sorong - 12 Day Itinerary aboard SH Minerva

• Explore Jayapura museums
• Discover Pulau Roon's landscapes
• Meet Kwatisore whale sharks
• Hike Mount Arfak

Starts / Ends

Jayapura / Sorong

Activities

Wildlife Viewing, Snorkeling, Village Visits, Local Market Visits, Whale Watching, Hiking, Archaeological Site Visits

Activity Level

Variable

Embark on a 12-day cruise across Indonesia’s Papua and Raja Ampat. Explore remote islands, vibrant coral reefs, and rich Papuan culture. Encounter whale sharks in Kwatisore, hike highlands in Baliem Valley, and discover Misool’s Yapap Lagoon. Experience unique wildlife, local traditions, and marine biodiversity.

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from $6,350

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SeaTrek the Remote Ring of Fire: East of Komodo

Komodo-Alor - 10 Day Itinerary aboard Katharina

• Witness fruit bat skies
• Encounter wild Komodo dragons
• Climb for panoramic views
• Experience local weaving crafts
• Visit historic Portuguese fort

Starts / Ends

Labuan Bajo / Maumere

Activity Level

Variable

Start your trip in Bali, flying to Labuan Bajo for a 10-day exploration of Komodo National Park and beyond aboard the Katharina. See Komodo dragons, snorkel with turtles, visit villages, and experience local landscapes and culture.

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from $12,700

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SeaTrek from the Spice Islands to the Dragon Islands (Ternate-Komodo)

Ternate to Komodo - 16 Day Itinerary aboard Ombak Putih

• Explore Tidore’s cloves and volcano
• Snorkel Guarici’s vibrant reefs
• Discover Bacan’s unique wildlife
• Witness Taliabu’s war dance
• Explore Banggai local markets
• Drift with majestic manta rays
• See iconic Komodo dragons

Starts / Ends

Ternate Island / Labuan Bajo

Activity Level

Variable

Embark on a 16-day cruise aboard Ombak Putih, exploring Indonesia’s culture, wildlife, and marine beauty. Highlights include historical Ternate, vibrant reefs, Bajau sea nomads, and Komodo dragons, with hikes and village visits.

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from $26,999

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Remote Indonesia & Islands Of The Pacific Theatre

Darwin - Lautoka - 23 Day Itinerary aboard Seabourn Pursuit

• Snorkel Raja Ampat reefs
• Birdwatch in Yenwaupnor forests
• Tour WWII sites Rabaul
• Visit Kokas rock art

Starts / Ends

Darwin / Lautoka

Activity Level

Variable

Explore the remote Indonesia & Islands of the Pacific Theatre on a 23-day cruise from Darwin to Lautoka aboard Seabourn Pursuit. Snorkel in Raja Ampat, explore WWII sites and witness vibrant cultures across Indonesia, Papua New Guinea, Solomon Islands, and Vanuatu.

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from $15,175

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Asian Island Odyssey: Cruising the Remote Islands of the Philippines & Indonesia, Taipei to Darwin

19 Day Itinerary aboard Heritage Adventurer

• Visit Yehliu Geopark
• Marvel at Tojoman Lagoo
• Explore Fort Belgica
• Swim with Whale Sharks

Starts / Ends

Taipei / Darwin

Activity Level

Variable

Join this 19-day Asian Island Odyssey, cruising from Taipei to Darwin aboard Heritage Adventurer. Traverse the Tropic of Cancer and the Equator. Explore islands with blue waters, pristine coral gardens, and intriguing wildlife. Highlights include Taiwan’s Yehliu Geopark and Taroko National Park, swimming with Whale Sharks, and more.

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from $8,100

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Papua's Whale Sharks and Birds of Paradise

Kaimana to Sorong - 10 Day Itinerary aboard Katharina

• Explore Triton Bay
• Snorkel and kayak vibrant waters
• Swim under the Kitikiti waterfall
• Visit Tomolol’s mysterious cave

Starts / Ends

Misool / Sorong

Activity Level

Variable

This 10-day South Pacific cruise aboard Katharina honors naturalist Alfred Russel Wallace, the co-founder of the theory of evolution. This magnificent tour takes you on land and sea to discover what captivated Wallace about this region of the world, especially the magnificent birds of paradise.

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from $14,499

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Remote Indonesia & Papua New Guinea

Lautoka - Darwin - 17 Day Itinerary aboard Seabourn Pursuit

• Experience Pentecost land diving
• Witness Ambrym Rom dance
• Dive at Million Dollar Point
• Discover Asmat woodcarving culture

Starts / Ends

Lautoka / Darwin

Activities

Photography Seminars

Activity Level

Variable

Explore remote islands and vibrant cultures on this 17-day cruise from Lautoka to Darwin aboard Seabourn Pursuit. Discover limestone caves in Fiji, witness Rom dances and land diving in Vanuatu, snorkel the pristine Conflict Islands, and visit Papua New Guinea’s historic and cultural villages. A rich journey across the South Pacific.

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from $21,900

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Darwin to Lautoka

24 Day Itinerary aboard Silver Cloud

• Learn WWII tunnel network
• Snorkel vibrant coral reefs
• Visit Garove volcanic caldera
• Wandre Lautoka’s botanical gardens

Starts / Ends

Darwin / Lautoka

Activity Level

Variable

Embark on a 24-day cruise aboard Silver Cloud, sailing from Darwin to Lautoka. Explore the untouched beauty and cultural richness of Papua New Guinea, the Solomon Islands, and Vanuatu. Snorkel in the crystal-clear waters off Ali Island and Kennedy Island, and delve into World War II history in Madang and Rabaul.

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from $1,868

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Magical Bali

8 Day Itinerary

• Visit the cultural hub of Ubud
• Experience market food
• Hike through rice fields
• Wander Sanur beach town

Activity Level

Relaxed

Journey into the ancient temples of Ubud, hike along the stunning country landscapes characterized by rice terraces, and explore the famous beach town of Sanur with a private, English-speaking guide on this 8-day tour.

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from $11,275

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Island Trails & Traditions of Indonesia

Singapore to Darwin - 18 Day Itinerary aboard Coral Geographer

• Snorkel Segun Island Reefs
• Swim Bawean’s White Beaches
• Encounter Komodo Island Dragons
• Experience Sawu Cultural Ceremony

Starts / Ends

Singapore / Darwin

Activity Level

Variable

Embark on an 18-day Island Trails & Traditions of Indonesia cruise aboard Coral Geographer, exploring Indonesia’s remote islands and rich cultures. Experience traditional ceremonies, explore Tana Toraja’s unique burial traditions, and join guided walks, cultural encounters, and wildlife adventures throughout this unique expedition.

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from $8,800

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Orangutans and Dragons

Bali - Komodo - 14 Day Itinerary aboard Ombak Putih

• Learn about Orangutans in Borneo
• Visit a Dayak community
• See volcanoes and Komodo dragons

Starts / Ends

Bali / Melo Village

Activity Level

Variable

Embark on a 14-day, two-part cruise aboard Ombak Putih and explore the rich wildlife and cultural heritage of Indonesia. Explore Borneo and visit an orangutan conservation center and a local Dayak village. Return to Bali and set sail to various islands, exploring the highlights of Komodo along the way.

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from $8,800

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Ancient Villages, Textiles, Dragons, and Vibrant Coral Reefs

Ende-Alor - 15 Day Itinerary aboard Katharina

• Explore Flores weaving villages
• Experience Kelimutu crater lakes
• Snorkel vibrant coral reefs
• Encounter wild Komodo dragons
• Uncover Solor Island
• Observe Uma Pura’s ikat textiles
• Spot the resident dugong Mawar

Starts / Ends

Ende / Alor Island

Activities

Stand Up Paddle Boarding, Wine Tasting

Activity Level

Variable

Discover Indonesia’s highlights on a 15-day journey from Ende to Alor, combining a 5-day overland and a 10-day sea cruise aboard the Katharina. Experience adventure, culture, and nature with expert guides as you explore Flores’s landscapes and the marine wonders of Komodo and Alor.

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