Have questions? We're here.
Two monkeys admire the statues

Indonesia Small Ship Cruises

Travel made your way
Talk with an expert
Build your ideal Indonesia trip. Call 1.406.541.2677
Start Planning My Trip
Explore Indonesia on a small ship cruise with Adventure Life. We work with all the top-rated small ship cruise lines visiting Sorong, Bali, Misool, Komodo Island, and Ambon Island, and we help match you with the perfect small ship and cruise itinerary for your specific tastes and needs. There are countless advantages to visiting Indonesia on a small ship cruise versus a large cruise ship including avoiding crowds and being able to visit and explore smaller ports and scenic shorelines that large ships simply cannot access.  The cost of small ship cruises to Indonesia start at $3,890 for a trip of 8 to 99 days in 2022. Tell us about your dream small ship cruise to Indonesia and our team of Indonesia travel experts will help you make it a reality.  
Filter (39 Results)
  • Start Date
    OR, More specific start
  • Length
    to
  • Price
    to
  • Activity Level
  • Experiences
  • Activities
  • Ship
  • Destinations
    • Indonesia
A pair of dragons on Komodo Island
$8,505
Save 20%
EXPLORE

Komodo National Park Cruise

8 Day Itinerary aboard Aqua Blu
  • Experience Pink Beach
  • Observe Komodo dragons
  • Enjoy the view of Sangeang volcano
  • Encounter friendly whale sharks
Starts/ Ends in:
Benoa / Labuan Bajo
Activities:
Small Ship Cruise, Snorkeling
Activity Level:
Relaxed
Sail between Bali and Labuan Bajo, and enjoy this voyage to see the best of the Nusa Tenggara archipelago. Stop at Moyo Island and the iconic Komodo National Park, a UNESCO World Heritage Site known for its native population of Komodo Dragons and the volcanic-sculpted Pink Beach as well as …
Cruise Details
0
Jewels of Raja Ampat cruise
$6,850
EXPLORE

Jewels of Raja Ampat

10 Day Itinerary aboard Katharina
  • Swim through Tomolol’s Cave
  • Trek in Batanta Island's jungle
  • Discover pristine coral reefs
  • Visit Aljui Bay's Pearl Farm
Activities:
Kayaking, Small Ship Cruise, Snorkeling, Village Visit, Wildlife Viewing
Activity Level:
Relaxed
Fall in love with Indonesia on this wonderful round-trip voyage from the enchanting city of Sorong. Indonesia can lay claim to such unsurpassed natural splendor as Raja Ampat’s Wayag Islands. Visit the Arefi Village and walk through its mangrove waters to the start point of an exceptional …
Cruise Details
0
Mountain Range in Komodo National Park, Indonesia
$3,890
EXPLORE

Whale Sharks, Corals & Dragons

Komodo-Bali - 8 Day Itinerary aboard Ombak Putih
  • Visit local communities
  • Snorkel along vibrant coral reefs
  • Enjoy a barbecue on the beach
  • Learn about unique species
Starts/ Ends in:
Komodo National Park / Bali
Activities:
Small Ship Cruises, Snorkeling, Village Visits, Wildlife Viewing
Activity Level:
Relaxed
Explore some of the highlights of southern Indonesia on this 8-day cruise from Komodo island to Bali. Board Ombak Putih after spending time looking for the famed Komodo dragon, then set sail for nearby islands to visit local villages, snorkel around vibrant coral reefs, and more. Hike for stunning …
Cruise Details
0
Dive among amazing corals
$13,445
EXPLORE

Indonesia Limited Cross: Spice Islands to Flores

13 Day Itinerary aboard Aqua Blu
  • Discover local pottery-making
  • Explore bird habitats
  • Visit old nutmeg plantations
  • Snorkel, swim, kayak and spear-fish
Starts/ Ends in:
Ambon Island / Maumere
Activities:
Kayaking, Small Ship Cruise, Snorkeling
Activity Level:
Relaxed
Board the Aqua Blu for a highly-limited 13-day limited cross voyage, which opens up the opportunity of exploring multiple destinations in East Indonesia on a single expedition and discovering lesser-explored treasures of the enchanting region.

This cruise also includes one-of-a-kind excursions, …
Cruise Details
0
Volcano scenery at sunrise
$13,100
EXPLORE

Indonesia Limited Cross: Flores to Spice Islands

Flores to Spice Islands - 13 Day Itinerary aboard Aqua Blu
  • Snorkel to the reef of Bacatan
  • Visit the fishing villages in Alor
  • Dive around Nyata island
  • Bike through islands on Daweloor
Starts/ Ends in:
Labuan Bajo / Ambon Island
Activities:
Small Ship Cruise, Snorkeling, Village Visit, Wildlife Viewing
Activity Level:
Relaxed
Take this opportunity to board Aqua Blu and explore multiple destinations in East Indonesia on a single expedition. Discover lesser-explored treasures of the enchanting region with one-of-a-kind excursions, including visits to the intriguing Abui tribe of Flores at Alor, journeys to the …
Cruise Details
0
Explore the culture of Indonesia
$8,505
Save 20%
EXPLORE

Indonesia Ambon and Spice Islands Cruise

8 Day Itinerary aboard Aqua Blu
  • Discover local pottery-making
  • Stroll through Dutch Fort Belgica
  • Visit old nutmeg plantations
  • Watch out for wildlife
Starts/ Ends in:
Ambon Island / Ambon Island
Activities:
Small Ship Cruise, Village Visit, Wildlife Viewing
Activity Level:
Relaxed
The focal point of the global spice trade in the 16th and 17th century, this region is endowed with well-preserved European relics alongside vibrant local traditions. Enriched by lava flows from the immense active volcano of Gunung Banda Api, nutrient-rich underwater gardens flourish in a …
Cruise Details
0
Grains and Spices at the market
$8,375
EXPLORE

The Scents of the Spice Islands

Ambon to Ternate - 12 Day Itinerary aboard Ombak Putih
  • Visit Hitu Lama
  • Snorkel over black lava stream
  • View production of sago
  • Trek towards a forest waterfall
Starts/ Ends in:
Ambon Island / Ternate Island
Activities:
Archaeological Site Visits, Small Ship Cruises, Snorkeling, Wildlife Viewing
Activity Level:
Relaxed
The Moluccas are the original Spice Islands; a magical destination, beautiful, remote and unspoiled, with a long, fascinating and turbulent history. For millennia these fertile volcanic isles were the world’s only source of the ‘holy trinity’ of rare spices; cloves, nutmeg, and …
Cruise Details
0
Traditional Balinese Statues and architecture
$8,375
EXPLORE

The East Indies on a Spice Island Exploration

12 Day Itinerary aboard Katharina
  • Visit Laratuka's unique churches
  • Explore the Forgotten Islands
  • Snorkel in crystal-clear water
  • Discover Indonesia’s Ring of Fire
Starts/ Ends in:
Maumere / Ambon Island
Activities:
Local Market Visits, Small Ship Cruises, Snorkeling, Village Visits, Wildlife Viewing
Activity Level:
Relaxed
Experience afascinating look at the colonial history of Indonesia and its role in the international spice trade during the 17th century. Travel in a eastward arc capturing the maritime route of the early colonials who traversed the Indonesian waters in search of the precious spices found within …
Cruise Details
0
Orangutans
$6,650
EXPLORE

Orangutans and Dragons

Bali-Bali - 12 Day Itinerary aboard Katharina
  • Visit a Dayak community
  • Learn about orangutans in Borneo
  • Snorkel over vibrant coral reefs
  • Spot Komodo dragons
Starts/ Ends in:
Bali / Bali
Activities:
Small Ship Cruise, Snorkeling, Stand Up Paddle Board, Village Visit, Wildlife Viewing
Activity Level:
Relaxed
Delve into learning about the wildlife and culture of Indonesia on this multi-part, 12-day tour and cruise. From Bali, fly to Borneo for a river cruise that visits an island operated by the Borneo Orangutan Survival Foundation, where you'll learn about these incredible great apes and …
Cruise Details
0
Tropical island in Sabah
$6,650
EXPLORE

Orangutans and Dragons

Bali-Bali - 12 Day Itinerary aboard Ombak Putih
  • Visit a Dayak community
  • Learn about orangutans in Borneo
  • Snorkel over vibrant coral reefs
  • Spot Komodo dragons
Starts/ Ends in:
Bali / Komodo Island
Activities:
Small Ship Cruise, Snorkeling, Stand Up Paddle Board, Village Visit, Wildlife Viewing
Activity Level:
Relaxed
Delve into learning about the wildlife and culture of Indonesia on this multi-part, 12-day tour and cruise. From Bali, fly to Borneo for a river cruise that visits an island operated by the Borneo Orangutan Survival Foundation, where you'll learn about these incredible great apes and conservation …
Cruise Details
0
Cruising Adventures! Banda Islands
$8,375
EXPLORE

East Indies Exploration: Culture, Sea & Spice

Maumere - Ambon - 12 Day Itinerary aboard Ombak Putih
  • Visit Laratuka's unique churches
  • Explore the Forgotten Islands
  • Snorkel in crystal-clear water
  • Discover Indonesia’s Ring of Fire
Activities:
Local Market, Small Ship Cruise, Snorkeling, Village Visit, Wildlife Viewing
Activity Level:
Relaxed
This unique itinerary is enhanced by descriptions and presentations by the Australian author Ian Burnet who spent 30 years living, working, and traveling in Indonesia. Experience afascinating look at the colonial history of Indonesia and its role in the international spice trade during the 17th …
Cruise Details
0
Snorkel the coral reefs of Indonesia
$19,480
EXPLORE

Exploring Indonesia: Bali, Raja Ampat & Papua New Guinea

Bali to Brisbane - 20 Day Itinerary aboard National Geographic Orion
  • Relax on stunning beaches
  • Search for Komodo dragons
  • Encounter traditional ceremonies
  • Learn about the region's history
Starts/ Ends in:
Bali / Brisbane
Activities:
Small Ship Cruise, Snorkeling, Village Visit, Wildlife Viewing
Activity Level:
Relaxed
Set sail from Bali on an expedition to discover Indonesia’s rich tapestry of cultures and lush tropical islands. Experience the thrill of spotting rare Komodo dragons in the wild; snorkel and dive at pristine coral reefs of the Moluccas, Raja Ampat and WestPapua; take part in exuberant …
Cruise Details
0
Singapore skyline
$13,530
EXPLORE

Singapore to Bali

12 Day Itinerary aboard National Geographic Orion
  • Snorkel coral reefs
  • Visit Borobudur Temple
  • Explore the jungles of Bali
  • Discover Singapore.
Starts/ Ends in:
Singapore / Bali
Activities:
Kayaking, Small Ship Cruises, Snorkeling, Stand Up Paddle Boarding, Village Visits, Wildlife Viewing
Activity Level:
Relaxed
Experience Indonesia onboard the National Geographic Orion on this 12-day cruise from Singapore to Bali. Drive through the remains of Krakatoa and see the "children" of the volcano, who have emerged since 1883 after one of the largest volcanic explosions in the world. Snorkel and dive in …
Cruise Details
0
$8,250
Savings
EXPLORE

Indonesian Explorer: Raja Ampat to Papua New Guinea

15 Day Itinerary aboard Heritage Adventurer
  • Visit Raja Ampat
  • Lookout for the endemic birds
  • Explore Pegunungan Nature Reserve
  • Swim at Cenderawasih Marine Park
Starts/ Ends in:
Manado / Madang
Activities:
Hiking, Small Ship Cruise, Village Visit, Wildlife Viewing
Activity Level:
Relaxed
A true expedition voyage in every sense, our inaugural journey will explore Indonesia's rarely visited and little known biodiverse-rich jungle-capped volcanic islands scattered across pristine pellucid waters well beyond traditional tourist routes. Joinacclaimed author, scientist and explorer …
Cruise Details
0
Mountain Range in Komodo National Park, Indonesia
$11,810
EXPLORE

Tropical Odyssey: North-East Australia and Indonesia

16 Day Itinerary aboard Le Laperouse
  • Discover the Asmat region
  • Learn about local culture
  • Explore the Malukus
  • Visit the Komodo National Park
Starts/ Ends in:
Cairns / Benoa
Activities:
Small Ship Cruises, Snorkeling, Spa Relaxation
Activity Level:
Relaxed
Join this 16-day tropical expedition voyage onboard the Le Laperouse between north-eastern Australia and Indonesia to discover its spectacular natural scenery. Lizard Island, nestled in the heart of Australia's Great Barrier Reef, is the first port of call on your cruise. The next day, sail …
Cruise Details
0
Tropical jungle of Borneo
$5,870
EXPLORE

Intriguing Indonesia

Singapore-Benoa, Bali - 10 Day Itinerary aboard Le Laperouse
  • Discover local culture
  • Explore Komodo National Park
  • Navigate to Belitung Islands
  • Visit Tanjung Puting National Park
Starts/ Ends in:
Singapore / Benoa
Activities:
Small Ship Cruises, Spa Relaxation, Wildlife Viewing
Activity Level:
Relaxed
Enjoy a 10-day expedition cruise aboard Le Lapérouse into the heart of fascinating Indonesia. Discover the largest archipelago in the world and sail the turquoise waters of the Belitung Islands. Explore the marvelous Komodo National Park, where the famous dragons, a prehistoric species, …
Cruise Details
0
Cruising Adventures! Banda Islands
$8,790
EXPLORE

The East Indies on a Spice Island Exploration

12 Day Itinerary aboard Ombak Putih
  • Visit Laratuka's unique churches
  • Explore the Forgotten Islands
  • Snorkel in crystal-clear water
  • Discover Indonesia’s Ring of Fire
Starts/ Ends in:
Maumere / Ambon Island
Activities:
Local Market Visits, Small Ship Cruises, Snorkeling, Village Visits, Wildlife Viewing
Activity Level:
Relaxed
This unique itinerary is enhanced by descriptions and presentations by the Australian author Ian Burnet who spent 30 years living, working, and traveling in Indonesia. Experience afascinating look at the colonial history of Indonesia and its role in the international spice trade during the 17th …
Cruise Details
0
Beautiful wild coast of Raja Ampat, Indonesia
$7,100
EXPLORE

Papua's Whale Sharks and Birds of Paradise

10 Day Itinerary aboard Ombak Putih
  • Swim under Kitikiti waterfall
  • Explore the maze of karst islands
  • View birds of paradise in nature
  • Enjoy the isolated Ceram Sea
Starts/ Ends in:
Sorong / Triton Bay
Activities:
Small Ship Cruises, Snorkeling, Wildlife Viewing
Activity Level:
Relaxed
Discover Raja Ampat, a globally renowned biodiversity hotspot,one of the world's most breathtaking destinations to cruise. This special itinerary celebrates Alfred Russel Wallace, a renowned scientist who was one of the first to express worry over the environmental consequences of human …
Cruise Details
0
1-18 of 39 Results

Top Indonesia Travel Destinations

Indonesia Trips by Departure Date

Top Experiences in Indonesia

Indonesia Trips by Duration

Indonesia Trips by Activity

More Reasons

Why Travel With Adventure Life

All News

Recognized By