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Indonesia Small Ship Cruises

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Cruising Adventures! Orangutan
from $8,800
EXPLORE

Orangutans and Dragons

Bali-Komodo - 13 Day Itinerary aboard Katharina
  • Visit a Dayak community
  • Learn about orangutans in Borneo
  • Snorkel over vibrant coral reefs
  • Spot Komodo dragons
Starts / Ends
Bali / Melo Village
Activities
Small Ship Sailing
Activity Level
Variable
Embark on a 13-day, two-part cruise aboard Katharina and explore the rich wildlife and cultural heritage of Indonesia. Explore Borneo and visit an orangutan conservation center and a local Dayak village. Return to Bali and set sail to various islands, exploring the highlights of Komodo along the way.
Cruise Details
0
A pair of dragons on Komodo Island
from $10,885
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Indonesia's Forgotten Islands

Darwin to Singapore - 14 Day Itinerary aboard Heritage Adventurer
  • Komodo dragon encounters
  • See Orangutans at Camp Leakey
  • Discover rare birds and wildlife
  • Snorkel at vibrant reefs
Starts / Ends
Darwin / Singapore
Activities
Whale Watching, Wildlife Viewing, Snorkeling
Activity Level
Variable
Travel from Darwin to Singapore on a 14-day cruise through Indonesia aboard Heritage Adventurer. Explore remote islands, snorkel coral reefs, encounter Komodo dragons, visit volcanic lakes, experience tribal cultures, and observe wild orangutans in protected rainforests.
Cruise Details
0
Explore Sulawesi
from $11,150
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SeaTrek With Rare Species, Remote Cultures & Remarkable Corals

Ternate - Bitung - 14 Day Itinerary aboard Ombak Putih
  • Snorkel Guraici's vibrant reefs
  • Discover Bacan’s unique wildlife
  • Explore Obi Latu plantations
  • Encounter rare Maleo birds
Starts / Ends
Ternate Island / Bitung
Activity Level
Variable
Join this 14-day cruise from Ternate to Bitung aboard the Ombak Putih. Sail past volcanoes, snorkel vibrant reefs, visit remote islands, swim with stingless jellyfish, and encounter whale sharks.
Cruise Details
0
A serene river surrounded by lush green forest in Raja Ampat, Kali Biru, Indonesia.
from $15,300
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Raja Ampat & Spice Islands Expedition

Sorong to Ambon - 11 Day Itinerary aboard Aqua Blu
  • Explore Kali Biru river
  • Dive Mayhem Reef thrills
  • Explore Banda Neira’s Dutch forts
  • Spot dugongs near Nusa Laut
Starts / Ends
Sorong / Ambon Island
Activities
Fishing, Cooking Classes, Festival Visits
Activity Level
Variable
Embark on an 11-day luxury cruise through Raja Ampat and the Spice Islands aboard Aqua Blu, visiting Sorong, Mioskon, Yangeffo, Aljui Bay, and Yeben Island. Snorkel with reef sharks and dugongs, explore ancient caves and Dutch forts, and experience local culture in Arborek Village and Nusa Laut.
Cruise Details
0
Purple Garden Coral Reefs in Indonesia
from $10,050
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In Search of Wallace and His Living Treasures with Dr. George Beccaloni

Ternate - Sorong - 12 Day Itinerary aboard Ombak Putih
  • Explore beautiful Ternate
  • Admire unique volcanic islands
  • Discover Bacan Island's wildlife
  • View Yar Island's flying foxes
Starts / Ends
Ternate Island / Sorong
Activity Level
Variable
This 12-day itinerary honors Alfred Russel Wallace’s observations of zoological differences across a narrow strait in the archipelago, proposing the Wallace Line, which separates the ecozones of Asia and Australia, in collaboration with Dr. George Beccaloni and Fauna & Flora International.
Cruise Details
0
Cruising Adventures! Snorkeling
from $10,400
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The Wonders of North Maluku: A Snorkelling, Wildlife & Cultural Adventure

Ternate - Ternate - 13 Day Itinerary aboard Katharina
  • Discover Makian Island landscapes
  • Explore Halmahera's local culture
  • Encounter wildlife in Bacan Island
  • Discover Ternate’s landmarks
Starts / Ends
Ternate Island / Ternate Island
Activity Level
Variable
Embark on a 13-day cruise aboard the Katharina. Explore North Maluku's islands, forests, and reefs, featuring cultural experiences, wildlife encounters, and snorkeling on pristine beaches.
Cruise Details
0
Misool Island in Raja Ampat Indonesia
from $8,100
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The Jewels of Raja Ampat

10 Day Itinerary aboard Ombak Putih
  • Discover the Misool archipelago
  • Explore Tomolol’s dome-topped cave
  • Spot the red bird of paradise
  • Admire Raja Ampat’s beauty
Starts / Ends
Sorong / Sorong
Activity Level
Variable
Join the Ombak Putih on this exceptional 10-day cruise of Indonesia and explore Raja Ampat. Kayaking and snorkeling are highlights of this itinerary, along with cultural visits to local villages that give you insights into the local way of life, customs, and traditions of life in this region of the world.
Cruise Details
0
Birds of Paradise
from $8,100
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Papua's Whale Sharks and Birds of Paradise

Sorong - Kaimana - 10 Day Itinerary aboard Ombak Putih
  • Swim under Kitikiti waterfall
  • Explore the maze of karst islands
  • View birds of paradise in nature
  • Enjoy the isolated Ceram Sea
Starts / Ends
Sorong / Triton Bay
Activity Level
Variable
Take a cruise from Sorong to Kaimana in discovering Papua's whale sharks and different bird-of-paradise species aboard the Ombak Putih ship on this 10-day voyage. Visit Dampier Strait, Misool Archipelago, Mainland of Papua, Triton Bay, and Namatote Passage.
Cruise Details
0
Sunset at an ocean resort in Raja Ampat, West Papua, Indonesia
from $20,090
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Raja Ampat and the Spice Islands

Darwin Roundtrip - 12 Day Itinerary aboard Le Soleal
  • Banda Neira history
  • Snorkel Raja Ampat reefs
  • Visit Kei Islands' white-sand beach
  • Learn about Spice Islands culture
Starts / Ends
Darwin / Darwin
Activities
Archaeological Site Visits
Activity Level
Variable
Set sail from Darwin through Indonesia on a 12-day cruise aboard Le Soleal, exploring Banda Neira, Raja Ampat, West Papua, and the Kei Islands. Snorkel coral reefs, hike jungle islands, visit historic spice ports, and swim beneath Kitikiti Waterfall in remote tropical settings.
Cruise Details
0
from $21,380
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North & South Raja Ampat Expedition

Sorong to Sorong - 15 Day Itinerary aboard Aqua Blu
  • Kayak Wayag’s blue lagoons
  • Snorkel Melissa’s Garden
  • Hike Kapatcol for birds
  • Swim with mantas Arborek
Starts / Ends
Sorong / Sorong
Activities
Kayaking
Activity Level
Variable
Discover the best of North and South Raja Ampat on a 15-day Aqua Blu cruise, starting in Sorong and visiting remote reefs, jungle trails, and limestone islands. Dive Cape Kri, kayak Wayag’s lagoons, spot birds of paradise, and snorkel with manta rays, all while enjoying onboard comforts.
Cruise Details
0
More sunsets in Raja Ampat, Pulau Wayag!
from $8,525
Save $1500
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Secrets of the Coral Triangle

Jayapura to Sorong - 12 Day Itinerary aboard SH Minerva
  • Explore Jayapura museums
  • Discover Pulau Roon's landscapes
  • Meet Kwatisore whale sharks
  • Hike Mount Arfak
Starts / Ends
Jayapura / Sorong
Activities
Village Visits, Local Market Visits, Hiking
Activity Level
Variable
Embark on a 12-day cruise across Indonesia’s Papua and Raja Ampat. Explore remote islands, vibrant coral reefs, and rich Papuan culture. Encounter whale sharks in Kwatisore, hike highlands in Baliem Valley, and discover Misool’s Yapap Lagoon. Experience unique wildlife, local traditions, and marine biodiversity.
Cruise Details
0
Mountain Range in Komodo National Park, Indonesia
from $7,050
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Immersive Indonesia: Singapore to Australia

Singapore to Australia - 14 Day Itinerary aboard M/S Paul Gauguin
  • Relax on Parai Beach
  • Discover ancient Semarang
  • Experience Bali’s culture
  • See Komodo dragons up close
Starts / Ends
Singapore / Darwin
Activities
Urban Exploration, Spa Relaxation
Activity Level
Variable
Cruise from Singapore to Darwin on a 14-day M/S Paul Gauguin adventure, visiting lively cities, beautiful beaches, and must-see spots like Bali, Komodo Island, and Timor-Leste. Relax onboard with great food, entertainment, and amazing views along the way.
Cruise Details
0
Purple Garden Coral Reefs in Indonesia
from $6,350
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SeaTrek the Remote Ring of Fire: East of Komodo

Komodo-Alor - 10 Day Itinerary aboard Katharina
  • Witness fruit bat skies
  • Encounter wild Komodo dragons
  • Climb for panoramic views
  • Experience local weaving crafts
  • Visit historic Portuguese fort
Starts / Ends
Labuan Bajo / Maumere
Activities
Stand Up Paddle Boarding
Activity Level
Variable
Start your trip in Bali, flying to Labuan Bajo for a 10-day exploration of Komodo National Park and beyond aboard the Katharina. See Komodo dragons, snorkel with turtles, visit villages, and experience local landscapes and culture.
Cruise Details
0
Stingless Jellyfish
from $12,700
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SeaTrek from the Spice Islands to the Dragon Islands (Ternate-Komodo)

Ternate to Komodo - 16 Day Itinerary aboard Ombak Putih
  • Explore Tidore’s cloves and volcano
  • Snorkel Guarici’s vibrant reefs
  • Discover Bacan’s unique wildlife
  • Witness Taliabu’s war dance
  • Explore Banggai local markets
  • Drift with majestic manta rays
  • See iconic Komodo dragons
Starts / Ends
Ternate Island / Labuan Bajo
Activity Level
Variable
Embark on a 16-day cruise aboard Ombak Putih, exploring Indonesia’s culture, wildlife, and marine beauty. Highlights include historical Ternate, vibrant reefs, Bajau sea nomads, and Komodo dragons, with hikes and village visits.
Cruise Details
0
Loboc river in the rainforest Philippines, Bohol
from $15,175
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Asian Island Odyssey

Keelung to Darwin - 19 Day Itinerary aboard Heritage Adventurer
  • Visit Yehliu Geopark
  • Marvel at Tojoman Lagoo
  • Explore Fort Belgica
  • Swim with Whale Sharks
Starts / Ends
Taipei / Darwin
Activity Level
Variable
Join this 19-day Asian Island Odyssey, cruising from Taipei to Darwin aboard Heritage Adventurer. Traverse the Tropic of Cancer and the Equator. Explore islands with blue waters, pristine coral gardens, and intriguing wildlife. Highlights include Taiwan’s Yehliu Geopark and Taroko National Park, swimming with Whale Sharks, and more.
Cruise Details
0
Bagan Shark in Triton Bay Indonesia
from $8,100
EXPLORE

Papua's Whale Sharks and Birds of Paradise

Kaimana to Sorong - 10 Day Itinerary aboard Katharina
  • Explore Triton Bay
  • Snorkel and kayak vibrant waters
  • Swim under the Kitikiti waterfall
  • Visit Tomolol’s mysterious cave
Starts / Ends
Misool / Sorong
Activity Level
Variable
This 10-day South Pacific cruise aboard Katharina honors naturalist Alfred Russel Wallace, the co-founder of the theory of evolution. This magnificent tour takes you on land and sea to discover what captivated Wallace about this region of the world, especially the magnificent birds of paradise.
Cruise Details
0
Mountain Range in Komodo National Park, Indonesia
from $10,180
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Crossing Oceania: Fiji to Bali

Lautoka to Benoa - 21 Day Itinerary aboard M/S Paul Gauguin
  • Hike Koroyanitu National Park
  • Snorkel Espiritu Santo reefs
  • Discover Komodo dragon habitat
  • Visit Ubud’s Sacred Monkey
Starts / Ends
Lautoka / Benoa
Activities
Scuba Diving
Activity Level
Variable
Embark on a 21-day Oceania cruise from Fiji to Bali aboard MS Paul Gauguin. Hike Koroyanitu National Park, snorkel Espiritu Santo, visit Guadalcanal’s WWII sites, explore Komodo, tour Ubud’s temples, enjoy Polynesian dance, and optional cooking classes and spa indulgence.
Cruise Details
0
Komodo Dragon in Indonesia
from $8,800
EXPLORE

Orangutans and Dragons

Bali - Komodo - 14 Day Itinerary aboard Ombak Putih
  • Learn about Orangutans in Borneo
  • Visit a Dayak community
  • See volcanoes and Komodo dragons
Starts / Ends
Bali / Melo Village
Activity Level
Variable
Embark on a 14-day, two-part cruise aboard Ombak Putih and explore the rich wildlife and cultural heritage of Indonesia. Explore Borneo and visit an orangutan conservation center and a local Dayak village. Return to Bali and set sail to various islands, exploring the highlights of Komodo along the way.
Cruise Details
0
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