Puerto Ayora Tours & Cruises in 2025

from $5,200

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Western Islands

6 Day Itinerary aboard Alya

Starts / Ends

Baltra / Bachas Beach

Activity Level

Variable

Embark the Alya on this 6-day catamaran cruise of the Western Galapagos Islands, visiting some of the most popular sites including the Tortoise Breeding Center on Santa Cruz, snorkeling in Elizabeth Bay on Isabela, kayaking around Urbina Bay at Fernandina, and hiking the Chinese Hat Islet near the southeast coast of Santiago, plus much more!

• Observe Galapagos giant tortoises
• See the blue-footed boobies dance
• Look for Galapagos penguins
• Cruise along Moreno Point

Cruise Details

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from $6,195

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Northern Islands

Baltra roundtrip - 4 Day Itinerary aboard Hermes Ultra Luxury Cruise

Starts / Ends

Baltra / Baltra

Activity Level

Variable

Embark on a 4-day North & Central Islands cruise aboard the Hermes Ultra Luxury Cruise. Observe Santa Cruz Highlands' giant tortoises and lava tunnels. Journey to Dragon Hill, home to land iguanas and flamingos then visit Chinese Hat. Explore El Barranco cliffs and Darwin Bay's bird paradise. Conclude with a marine life excursion in Black Turtle Cove.

• Spot giant tortoises in Highlands
• Visit Cerro Dragón and see iguanas
• Explore Genovesa Island's paradise

Cruise Details

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from $265

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Santa Fe Island

1 Day Itinerary aboard Galaxy Daily

Starts / Ends

Puerto Ayora / Santa Fe

Activity Level

Variable

Embark on an unforgettable one-day trip aboard the Galaxy Daily to discover the natural beauty of Santa Fe Island in the Galapagos. Enjoy a wet landing, and a walking tour to see unique species, swim, and snorkel in Encañada's warm waters to observe marine life. An unforgettable experience awaits.

• Explore Santa Fe's resident species
• Jump on the white sand beach
• Experience a swim in the Encañada

Cruise Details

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from $2,181

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Walk in Darwin’s Footsteps

4 Day Itinerary

Starts / Ends

Baltra / Baltra

Activities

Snorkeling, Wildlife Viewing, Small Ship Sailing

Activity Level

Relaxed

Enjoy this 4-day island-hopping adventure on Santa Cruz Island, Galapagos. Explore the highlands, visit the Charles Darwin Research Station, and marvel at the Twin Craters. Stay at the luxurious Angermeyer Waterfront Inn, enjoying guided tours that immerse you in the island’s unique beauty.

• See giant tortoise
• Learn about local conservation
• Enjoy water activities
• See wildlife and landscapes
• See the twin craters of the island

Tour Details

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from $6,195

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Southern Islands

San Cristobal - Baltra - 4 Day Itinerary aboard Hermes Ultra Luxury Cruise

Starts / Ends

San Cristobal Airport / Baltra

Activity Level

Variable

Set sail on a 4-day Hermes Ultra Luxury Cruise to the Eastern Galapagos Islands. Explore San Cristóbal, and visit Tijeretas Hill. Enjoy Gardner Bay and Punta Suárez on Española, then discover unique beaches, flamingos, and marine life at Punta Cormorant on Floreana. Conclude your journey at the Charles Darwin Research Station and fly back home.

• Visit Tijeretas Hill bird colony
• Discover Floreana Island's beaches
• Snorkel with sea lions

Cruise Details

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from $117,705

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Private Charter - Southern Islands Aboard Hermes Ultra Luxury Cruise

4 Day Itinerary aboard Hermes Ultra Luxury Cruise

Starts / Ends

San Cristobal Airport / Baltra

Activity Level

Variable

Set sail on a private 4-day Hermes Ultra Luxury Cruise to the Eastern Galapagos Islands. Explore San Cristóbal, and visit Tijeretas Hill. Enjoy Gardner Bay and Punta Suárez on Española, then discover unique beaches, flamingos, and marine life at Punta Cormorant on Floreana. Conclude your journey at the Charles Darwin Research Station and fly back home.

• Visit Tijeretas Hill bird colony
• Discover Floreana Island's beaches
• Snorkel with sea lions

Cruise Details

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from $12,995

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Central East & Southern Islands

Baltra roundtrip - 8 Day Itinerary aboard Hermes Ultra Luxury Cruise

Starts / Ends

Baltra / Baltra

Activity Level

Variable

Explore Central East & Southern Islands on this 8-day cruise aboard Hermes Ultra Luxury Cruise. Visit Baltra and meet giant tortoises. Enjoy geological wonders and encounter diverse wildlife on Rábida, Bartolomé, South Plaza, and Santa Fe. End at Fausto Llerena Breeding Center to see Galápagos tortoises and support conservation efforts.

• Explore lava tunnels in Santa Cruz
• Visit Rábida's red sand beach
• See marine iguanas at Punta Pitt
• Encounter wildlife at Isla Lobos

Cruise Details

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from $5,173

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Hotel Silberstein

10 Day Itinerary

Activity Level

Relaxed

Looking for a cruise alternative? Our Hotel Silberstein land based tour option allows you to explore the marvels of the Galapagos Islands without having to acquire sea legs! Discover iguanas, comical blue-footed boobies, and the famous Galapagos sea turtles. In the evenings you can stroll the beaches of Puerto Ayora before retiring to your hotel.

• Learn about local conservation
• View sea lions & frigrate birds
• Climb Bartolome Island for views
• Mail a postcard from Floreana

Tour Details

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from $246,905

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Private Charter - Central East & Southern Islands Aboard Hermes Ultra Luxury Cruise

8 Day Itinerary aboard Hermes Ultra Luxury Cruise

Starts / Ends

Baltra / Baltra

Activities

Kayaking, Hiking, Stand Up Paddle Boarding

Activity Level

Variable

Explore Central East & Southern Islands on this 8-day private cruise aboard Hermes Ultra Luxury Cruise. Visit Baltra and meet giant tortoises. Enjoy geological wonders and encounter diverse wildlife on Rábida, Bartolomé, South Plaza, and Santa Fe. End at Fausto Llerena Breeding Center to see Galápagos tortoises and support conservation efforts.

• Explore lava tunnels in Santa Cruz
• Visit Rábida's red sand beach
• See marine iguanas at Punta Pitt
• Encounter wildlife at Isla Lobos

Cruise Details

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from $117,705

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Private Charter - Northern Islands Aboard Hermes Ultra Luxury Cruise

4 Day Itinerary aboard Hermes Ultra Luxury Cruise

Starts / Ends

Baltra / Baltra

Activity Level

Variable

Embark on a private 4-day North & Central Islands Galapagos cruise aboard the Hermes Ultra Luxury Cruise. Observe Santa Cruz Highlands' giant tortoises and lava tunnels. Journey to Dragon Hill, home to land iguanas and flamingos then visit Chinese Hat. Explore El Barranco cliffs and Darwin Bay's bird paradise. Conclude with a visit in Black Turtle Cove.

• Spot giant tortoises in Highlands
• Visit Cerro Dragón and see iguanas
• Explore Genovesa Island's paradise

Cruise Details

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from $49,450

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Private Charter - North Central Islands Aboard Natural Paradise

4 Day Itinerary aboard Natural Paradise

Starts / Ends

Baltra / Baltra

Activity Level

Variable

Sail the North Central Islands of the Galapagos, including Santa Cruz, Santiago, Genovesa, and Rabida on this 4-day private cruise aboard Natural Paradise.

• Admire El Barranco's amazing views
• Swim with sea lions at Darwin Bay
• See Bachas Beach's floating pier

Cruise Details

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from $3,245

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North Central Islands

4 Day Itinerary aboard Natural Paradise

Activity Level

Variable

Enjoy an amazing 4-day cruise exploring the highlights of the North Central Islands of the Galapagos archipelago, including Santa Cruz, Santiago, Genovesa, and Rabida, aboard the Natural Paradise.

• Admire El Barranco's amazing views
• Swim with sea lions at Darwin Bay
• See Bachas Beach's floating pier

Cruise Details

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from $7,867

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Western Islands

7 Day Itinerary aboard La Pinta

Activity Level

Variable

Explore the red beaches of Rabida and visit the Charles Darwin Research Station aboard the La Pinta. Hike, snorkel, and relax on this 7-day tour of the Western Islands.

• Snorkel around Champion Islet
• View lava how flows
• Hike across North Seymour Island
• Play with sea lions

Cruise Details

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from $11,500

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Galapagos Inner Loop

San Cristobal to San Cristobal - 8 Day Itinerary aboard Silver Origin

Starts / Ends

San Cristobal / San Cristobal Airport

Activity Level

Variable

Embark the luxurious Silver Origin on an 8-day adventure from San Cristobal to San Cristobal. Acquaint yourselves with Kicker Rock island, Punta Cormorant, Tagus Cove and Elizabeth Bay to name a few.

• Witness marine life
• See the view at Isla Bartolomé
• Walk through a pirate island
• See some awesome wildlife

Cruise Details

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from $79,040

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Private Charter - Western Islands Aboard Alya

6 Day Itinerary aboard Alya

Starts / Ends

Baltra / Bachas Beach

Activity Level

Variable

Board the Alya on this 6-day private cruise of the Western Galapagos Islands, visiting some of the most popular sites including the Tortoise Breeding Center on Santa Cruz, snorkeling in Elizabeth Bay on Isabela, kayaking around Urbina Bay at Fernandina, and hiking the Chinese Hat Islet near the southeast coast of Santiago, plus much more.

• Observe Galapagos giant tortoises
• See the blue-footed boobies dance
• Look for Galapagos penguins
• Cruise along Moreno Point

Cruise Details

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from $385,050

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Private Charter - Western Islands Aboard La Pinta

7 Day Itinerary aboard La Pinta

Starts / Ends

North Seymour / Baltra

Activities

Whale Watching

Activity Level

Variable

Experience the Galapagos Islands like never before during this 7-day Western Islands private cruise aboard La Pinta. Discover the volcanic landscapes of Punta Espinoza in Fernandina, the spectacular red beaches of Rabida on Santa Cruz Island, and snorkel or glass-bottom boat ride along the coast of Champion Islet in Floreana.

• Snorkel around Champion Islet
• View lava how flows
• Hike across North Seymour Island
• Play with sea lions

Cruise Details

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from $4,532

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Finch Bay Eco-Hotel

5 Day Itinerary

Starts / Ends

Baltra / North Seymour

Activities

Village Visits

Activity Level

Relaxed

Set the pace of your Galapagos adventure with a 5-day stay at the Finch Bay Eco-Hotel. Spend your time exploring the natural beauty and wildlife of the islands or relax in the comfort of your seaside hotel. Additional excursions can also be arranged if you wish.

• View Giant Tortoises
• Snorkel along shallow reefs
• Choose from a menu of activities

Tour Details

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from $10,920

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West Galapagos

Santa Cruz - Baltra - 8 Day Itinerary aboard Aqua Mare

Starts / Ends

Puerto Ayora / Baltra

Activity Level

Variable

Witness the greatest spectacle of evolution and dynamic volcanic terrains on this 8-day West Galapagos expedition from Santa Cruz Island to Baltra Island aboard Aqua Mare. Tour Fausto Llerena Breeding Centre, Punta Cormorant, Punta Moreno, Punta Espinoza, Puerta Egas, Rábida, North Seymour, and Mosquera.

• Enjoy Isabela landscapes
• Explore Darwin Lake
• Visit Playa Espumilla
• Discover Rábida Island

Cruise Details

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